Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015822149.1_cds_XP_016501003.1_14779
CDS Infomation

[gene=LOC107819408] [db_xref=GeneID:107819408] [protein=beta-glucosidase BoGH3B-like] [protein_id=XP_016501003.1] [location=complement(join(3613..4100,4581..4785,4872..5054,5179..5283,5385..5628,5780..5925,6002..6092,6494..6698,7290..7509))] [gbkey=CDS]
Sequence

ATGGGGAGAATGTCAATACCCATGATGGGTTTTGTGGTGTTATGTCTATGGGCAGTGGTA
GCAGAAGGAGAATATGTGAAATACAAGGACCCAAAACAGCCAGTAGGAGCTAGAATCAAG
GATTTGATGAAAAGGATGACACTTGAGGAGAAGATTGGTCAGATGACTCAGATTGAGAGA
AAAGTTGCCACTGCTGATGTTATGAAGCAAAACTTCATTGGGAGTGTATTGAGTGGTGGA
GGAAGTGTCCCTGCACCTAAGGCCTCTGCTCAGGTTTGGACCAATATGGTAGATGAGATT
CAAAAGGGTTCTCTTTCGACCCGTCTTGGTATTCCCATGATTTATGGAATCGATGCCGTT
CATGGTCACAACAATGTCTATGGGGCTACAATCTTTCCTCACAATGTTGGGCTTGGTGTT
ACCAGGGATCCTGATCTTGTGAAGCGTATTGGGGCTGCAACTGCACTTGAAGTTAGAGCT
ACAGGAATTCCATATGCCTTCGCTCCCTGCATTGCAGTATGTAGAAATCCTAGATGGGGC
CGTTGTTATGAGAGTTACAGTGAAGATCATAGGATCGTTCGAAGCATGACAGAGATCATT
CCTGGCCTGCAAGGAGATTTACCTGCTAAATCAAAGAATGGTGTTCCTTATGTCGGAGGA
AAGACTAAGGTTGCGGCCTGTGCTAAGCACTTTGTGGGAGATGGTGGCACGTTGCACGGC
GTTGATGAAAGTAACACAGTAATCAGCTCAAACAGTTTATTTAGCATCCACATGCCTGCA
TATTATGACTCACTCAGAAAGGGTGTTGCAACGGTTATGGTGTCTTACTCAAGCTGGAAC
GGAAGAAAGATGCACGCCAACCGAGATCTAGTCACTGGCTTCCTTAAGGACAAGCTCAAG
TTCAGGGGTTTCGTCATTTCAGATTGGCAAGGGATTGACCGGATTACTGATCCACCTCAT
GCTAACTACTCTTATTCAGTTCAAGCTGGAATTATGGCAGGAATCGACATGATTATGGTC
CCAGAGAATTATAGAGAGTTTATCGATACTTTGACTTCTCAAGTGAAAGCCAATATCATT
CCCATGAGCAGAATTGATGATGCTGTGAAGCGGATATTGAGAGTAAAATTTGTTATGGGT
CTCTTCGAGAACCCAATGTCGGACCCTAGCTTGGCAAACCAACTGGGTAGCCAGGAGCAT
AGAGAATTAGCAAGGGAAGCAGTTAGGAAATCACTCGTGCTCTTGAAGAATGGCAAGACG
CCTAGTCAGCCACTACTTCCTCTTCCAAAGAAAGCACCAAAAATACTTGTTGCCGGAACT
CATGCAGACAACTTGGGTTACCAATGTGGAGGCTGGACAATTGAATGGCAGGGAGTTGCT
GGCAACGATCTTACTATTGGGACCACCATTTTAACTGCTATCAAGAAAACTGTTGATCCT
TCTACACAAGTAGTGTACCAGCAGAATCCTGATGCGAACTTCGTAAAGTCCAACAAATTC
TCCTATGCCATTGTGGTTGTGGGTGAAGTCCCATATGCAGAGATGTTTGGCGACAGCTCA
AATCTCACAATAGCTGAACCAGGTCCTAGCACCATCAGTAACATCTGTGGATCAGTGAAG
TGTGTTGTAGTCGTAGTCTCTGGTCGTCCAGTCGTGCTGGAGCCTTACGTTTCAAAAATG
GATGCCCTCGTTGCTGCTTGGCTCCCTGGAACTGAAGGTCAAGGTGTTGCTGATGCTTTA
TTTGGTGACTATGGCTTCACTGGAAAACTTGCTCGCACTTGGTTCAAGAGAGTTGATCAG
CTTCCAATGAACTTTGACGATGCACACGTTGATCCCCTCTTTCCCTTTGGATTTGGCATC
ACAACTAAACCAGTGAAAGGCTACTAG

Peptide Sequence

PEP ID

XP_016501003.1
PEP Infomation

PREDICTED: beta-glucosidase BoGH3B-like [Nicotiana tabacum]
Sequence

MGRMSIPMMGFVVLCLWAVVAEGEYVKYKDPKQPVGARIKDLMKRMTLEEKIGQMTQIER
KVATADVMKQNFIGSVLSGGGSVPAPKASAQVWTNMVDEIQKGSLSTRLGIPMIYGIDAV
HGHNNVYGATIFPHNVGLGVTRDPDLVKRIGAATALEVRATGIPYAFAPCIAVCRNPRWG
RCYESYSEDHRIVRSMTEIIPGLQGDLPAKSKNGVPYVGGKTKVAACAKHFVGDGGTLHG
VDESNTVISSNSLFSIHMPAYYDSLRKGVATVMVSYSSWNGRKMHANRDLVTGFLKDKLK
FRGFVISDWQGIDRITDPPHANYSYSVQAGIMAGIDMIMVPENYREFIDTLTSQVKANII
PMSRIDDAVKRILRVKFVMGLFENPMSDPSLANQLGSQEHRELAREAVRKSLVLLKNGKT
PSQPLLPLPKKAPKILVAGTHADNLGYQCGGWTIEWQGVAGNDLTIGTTILTAIKKTVDP
STQVVYQQNPDANFVKSNKFSYAIVVVGEVPYAEMFGDSSNLTIAEPGPSTISNICGSVK
CVVVVVSGRPVVLEPYVSKMDALVAAWLPGTEGQGVADALFGDYGFTGKLARTWFKRVDQ
LPMNFDDAHVDPLFPFGFGITTKPVKGY

Transcript Sequence

Gene sequence data has not been registered.